STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP_0400510F-box domain-containing protein. (483 aa)    
Predicted Functional Partners:
SCP_0404960
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 
 0.743
SCP_0309370
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.632
SCP_1101580
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.632
SCP_0108550
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.437
SCP_0213910
Serine/threonine-protein phosphatase.
  
  
 0.437
SCP_0301840
Serine/threonine-protein phosphatase.
  
  
 0.437
SCP_0508550
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.437
SCP_0604680
Serine/threonine-protein phosphatase.
  
  
 0.437
SCP_1004400
Serine/threonine-protein phosphatase.
  
  
 0.437
SCP_1201880
Metallophos domain-containing protein.
  
  
 0.437
Your Current Organism:
Sparassis crispa
NCBI taxonomy Id: 139825
Other names: S. crispa
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