STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP_1003060Uncharacterized protein. (851 aa)    
Predicted Functional Partners:
SCP_0110860
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.997
SCP_0111750
40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.997
SCP_0313140
40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.997
SCP_0509440
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.997
SCP_0703940
40S ribosomal protein S19-A.
   
 0.997
SCP_0904570
40S ribosomal protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.997
SCP_0108560
40S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family.
  
 0.996
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.996
SCP_0207960
TPR_REGION domain-containing protein.
   
 0.996
SCP_0213960
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.996
Your Current Organism:
Sparassis crispa
NCBI taxonomy Id: 139825
Other names: S. crispa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.