KML45956.1 protein (Bacillus firmus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Bacillus firmus

NCBI taxonomy Id: 1399
Other names: ATCC 14575, B. firmus, BCRC 11730, Bacillaceae bacterium HQ2, Bacillus sp. JP44SK20, Bacillus sp. LK28, Bacillus sp. NCIM 2264, Bacillus sp. NCIM 2462, CCM 2213, CCRC 11730, CCRC:11730, CCUG 7418, CIP 52.70, DSM 12, IAM 12464, IFO 15306, JCM 2512, LMG 7125, LMG:7125, NBRC 15306, NCAIM B.01087, NCCB 48015, NCIB 9366, NCIMB 9366, NCTC 10335, NRRL B-14307, NRRL NRS-613, VKM B-498

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KML37554.1	KML41522.1	VL14_18745	VL14_10865	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
KML37554.1	KML45955.1	VL14_18745	VL14_02635	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
KML37554.1	KML45956.1	VL14_18745	VL14_02640	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
KML37554.1	KML45957.1	VL14_18745	VL14_02645	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
KML37554.1	gpr	VL14_18745	VL14_13600	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.	0.728
KML41522.1	KML37554.1	VL14_10865	VL14_18745	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
KML41522.1	KML45955.1	VL14_10865	VL14_02635	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
KML41522.1	KML45956.1	VL14_10865	VL14_02640	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
KML41522.1	KML45957.1	VL14_10865	VL14_02645	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KML41522.1	KML46153.1	VL14_10865	VL14_01670	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation sigma factor SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.730
KML41522.1	KML46155.1	VL14_10865	VL14_01690	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
KML41522.1	gpr	VL14_10865	VL14_13600	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.	0.773
KML45955.1	KML37554.1	VL14_02635	VL14_18745	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
KML45955.1	KML41522.1	VL14_02635	VL14_10865	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
KML45955.1	KML45956.1	VL14_02635	VL14_02640	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
KML45955.1	KML45957.1	VL14_02635	VL14_02645	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
KML45955.1	KML45958.1	VL14_02635	VL14_02650	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.807
KML45955.1	KML46153.1	VL14_02635	VL14_01670	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation sigma factor SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.822
KML45955.1	KML46154.1	VL14_02635	VL14_01685	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
KML45955.1	KML46155.1	VL14_02635	VL14_01690	Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927

page 1 of 5

Server load: low (16%) [HD]

Share

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About