KML43012.1 protein (Bacillus firmus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KML43012.1

Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (312 aa)

Predicted Functional Partners:

KML43014.1

0.999

KML43015.1

0.999

KML37890.1

0.964

KML37891.1

0.932

KML43523.1

0.635

KML42390.1

0.634

rpmB

0.610

rpsN

0.566

mntR

0.540

KML43054.1

0.539

Your Current Organism:

Bacillus firmus

NCBI taxonomy Id: 1399
Other names: ATCC 14575, B. firmus, BCRC 11730, Bacillaceae bacterium HQ2, Bacillus sp. JP44SK20, Bacillus sp. LK28, Bacillus sp. NCIM 2264, Bacillus sp. NCIM 2462, CCM 2213, CCRC 11730, CCRC:11730, CCUG 7418, CIP 52.70, DSM 12, IAM 12464, IFO 15306, JCM 2512, LMG 7125, LMG:7125, NBRC 15306, NCAIM B.01087, NCCB 48015, NCIB 9366, NCIMB 9366, NCTC 10335, NRRL B-14307, NRRL NRS-613, VKM B-498

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KML37890.1	KML37891.1	VL14_18250	VL14_18255	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KML37890.1	KML42390.1	VL14_18250	VL14_08545	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
KML37890.1	KML43012.1	VL14_18250	VL14_07970	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.964
KML37890.1	KML43014.1	VL14_18250	VL14_07980	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
KML37890.1	KML43015.1	VL14_18250	VL14_07985	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
KML37890.1	KML43054.1	VL14_18250	VL14_07960	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.401
KML37890.1	KML43523.1	VL14_18250	VL14_05555	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KML37890.1	rpsN	VL14_18250	VL14_20510	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.507
KML37891.1	KML37890.1	VL14_18255	VL14_18250	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KML37891.1	KML43012.1	VL14_18255	VL14_07970	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.932
KML37891.1	KML43014.1	VL14_18255	VL14_07980	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KML42390.1	KML37890.1	VL14_08545	VL14_18250	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
KML42390.1	KML43012.1	VL14_08545	VL14_07970	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.634
KML42390.1	rpmB	VL14_08545	VL14_07050	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.	0.645
KML42390.1	rpsN	VL14_08545	VL14_20510	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.784
KML43012.1	KML37890.1	VL14_07970	VL14_18250	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
KML43012.1	KML37891.1	VL14_07970	VL14_18255	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
KML43012.1	KML42390.1	VL14_07970	VL14_08545	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.634
KML43012.1	KML43014.1	VL14_07970	VL14_07980	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KML43012.1	KML43015.1	VL14_07970	VL14_07985	Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999

page 1 of 3

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About