Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KML40503.1 | KML41517.1 | VL14_13705 | VL14_10885 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| KML40503.1 | KML41522.1 | VL14_13705 | VL14_10865 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.745 |
| KML40503.1 | KML45955.1 | VL14_13705 | VL14_02635 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| KML40503.1 | KML45956.1 | VL14_13705 | VL14_02640 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| KML40503.1 | KML45957.1 | VL14_13705 | VL14_02645 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| KML40503.1 | KML46023.1 | VL14_13705 | VL14_02285 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.753 |
| KML40503.1 | KML46024.1 | VL14_13705 | VL14_02290 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| KML40503.1 | KML46211.1 | VL14_13705 | VL14_01985 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.771 |
| KML40503.1 | KML46471.1 | VL14_13705 | VL14_00915 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| KML40503.1 | KML46607.1 | VL14_13705 | VL14_00510 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.745 |
| KML41517.1 | KML40503.1 | VL14_10885 | VL14_13705 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.757 |
| KML41517.1 | KML41522.1 | VL14_10885 | VL14_10865 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| KML41517.1 | KML45955.1 | VL14_10885 | VL14_02635 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| KML41517.1 | KML45956.1 | VL14_10885 | VL14_02640 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
| KML41517.1 | KML45957.1 | VL14_10885 | VL14_02645 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.766 |
| KML41517.1 | KML46023.1 | VL14_10885 | VL14_02285 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. | 0.720 |
| KML41517.1 | KML46024.1 | VL14_10885 | VL14_02290 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| KML41517.1 | KML46211.1 | VL14_10885 | VL14_01985 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.777 |
| KML41517.1 | KML46471.1 | VL14_10885 | VL14_00915 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| KML41517.1 | KML46607.1 | VL14_10885 | VL14_00510 | Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
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