Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KML35942.1Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)    
Predicted Functional Partners:
KML36210.1
Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.978
KML36212.1
Stress response protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
 
  
 0.976
KML40543.1
Stage V sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.669
KML46471.1
Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.621
KML36207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.590
KML43678.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.579
KML42118.1
Spore gernimation protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.
  
  
 0.559
KML35937.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
KML35941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
spoVFB
Dipicolinate synthase subunit B; Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA).
  
   
 0.503
Your Current Organism:
Bacillus firmus
NCBI taxonomy Id: 1399
Other names: ATCC 14575, B. firmus, BCRC 11730, Bacillaceae bacterium HQ2, Bacillus sp. JP44SK20, Bacillus sp. LK28, Bacillus sp. NCIM 2264, Bacillus sp. NCIM 2462, CCM 2213, CCRC 11730, CCRC:11730, CCUG 7418, CIP 52.70, DSM 12, IAM 12464, IFO 15306, JCM 2512, LMG 7125, LMG:7125, NBRC 15306, NCAIM B.01087, NCCB 48015, NCIB 9366, NCIMB 9366, NCTC 10335, NRRL B-14307, NRRL NRS-613, VKM B-498
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.