STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ07406.1Large terminase protein. (624 aa)    
Predicted Functional Partners:
ETZ07408.1
Modification methylase Cfr9I.
    
 0.962
ETZ07404.1
Phage portal protein, lambda family.
 
  
 0.899
ETZ07402.1
Portal protein.
 
  
 0.876
ETZ07254.1
Putative protein YnaK.
    
 0.842
ETZ07407.1
Hypothetical protein.
       0.792
ETZ07392.1
Baseplate assembly protein J.
 
  
 0.782
ETZ07405.1
gpW.
       0.773
ETZ07391.1
Bacteriophage P2-related tail formation protein.
  
  
 0.763
ETZ07395.1
Baseplate assembly protein V.
 
  
 0.737
ETZ07393.1
Baseplate assembly protein W.
  
    0.736
Your Current Organism:
Holospora obtusa
NCBI taxonomy Id: 1399147
Other names: H. obtusa F1, Holospora obtusa F1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.