STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ06910.1Putative protein YtxE. (303 aa)    
Predicted Functional Partners:
ETZ07702.1
Outer membrane lipoprotein Omp16.
   
 0.823
ETZ07465.1
Hypothetical protein.
 
     0.801
ETZ06755.1
Blue-light-activated protein.
  
  
 0.784
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
       0.773
ETZ07425.1
Putative ABC transporter-binding protein.
   
   0.752
yajC
Immunogenic membrane protein YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.615
ETZ07607.1
Protein TolR.
    
 
 0.571
ETZ07013.1
Hypothetical protein.
 
      0.539
ETZ07770.1
Thiol-disulfide oxidoreductase.
    
   0.531
ETZ07618.1
Hypothetical protein.
    
   0.531
Your Current Organism:
Holospora obtusa
NCBI taxonomy Id: 1399147
Other names: H. obtusa F1, Holospora obtusa F1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.