STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ06753.1Type III secretion system outer membrane pore InvG; Belongs to the bacterial secretin family. (581 aa)    
Predicted Functional Partners:
ETZ06754.1
Virion export protein; Belongs to the bacterial secretin family.
 
   
0.856
ETZ06755.1
Blue-light-activated protein.
  
  
 0.849
ETZ06764.1
Hypothetical protein.
  
  
 0.630
ETZ06925.1
Type II secretion system protein D.
 
 
  0.618
ETZ06751.1
Phosphoglucosamine mutase.
   
   0.541
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
  
    0.536
ETZ07347.1
Putative transcriptional regulator YgiV.
  
  
 0.513
ETZ07606.1
Hypothetical protein.
 
     0.471
ETZ06705.1
DNA polymerase III subunit chi.
  
    0.457
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
       0.429
Your Current Organism:
Holospora obtusa
NCBI taxonomy Id: 1399147
Other names: H. obtusa F1, Holospora obtusa F1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.