STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnjUnannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_000518285_00578
Unannotated protein.
 
 0.998
rnj-2
Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
 
 
0.954
GCA_000518285_00721
Unannotated protein.
  
 
 0.813
ftsK
Unannotated protein; Belongs to the FtsK/SpoIIIE/SftA family.
 
    0.790
GCA_000518285_00720
Unannotated protein.
 
 
0.736
GCA_000518285_00577
Unannotated protein.
  
    0.649
infA
Unannotated protein; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
  
 
 0.474
rny
Unannotated protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
  
 
 0.437
Your Current Organism:
Entomoplasma lucivorax
NCBI taxonomy Id: 1399797
Other names: E. lucivorax ATCC 49196, Entomoplasma lucivorax ATCC 49196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.