STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518265_05276Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_000518265_05279
Unannotated protein.
 
   
 0.969
GCA_000518265_05277
Unannotated protein.
 
   
 0.967
GCA_000518265_05278
Unannotated protein.
 
   
 0.963
GCA_000518265_05283
Unannotated protein.
 
   
 0.942
GCA_000518265_05282
Unannotated protein.
 
   
 0.941
GCA_000518265_05280
Unannotated protein.
 
   
 0.937
GCA_000518265_05281
Unannotated protein.
 
   
 0.937
GCA_000518265_01461
Unannotated protein.
 
     0.806
GCA_000518265_01462
Unannotated protein.
 
     0.718
GCA_000518265_05275
Unannotated protein.
       0.489
Your Current Organism:
Actinomadura oligospora
NCBI taxonomy Id: 1399798
Other names: A. oligospora ATCC 43269, Actinomadura oligospora ATCC 43269
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.