STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518265_06217Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_000518265_05633
Unannotated protein.
  
 0.596
GCA_000518265_05607
Unannotated protein.
  
 0.583
GCA_000518265_08214
Unannotated protein.
   
   0.582
GCA_000518265_05572
Unannotated protein.
     
 0.579
GCA_000518265_06216
Unannotated protein.
       0.517
GCA_000518265_01032
Unannotated protein.
  
  0.491
GCA_000518265_02617
Unannotated protein.
  
  0.486
GCA_000518265_07329
Unannotated protein.
  
  0.484
GCA_000518265_07328
Unannotated protein.
  
  0.483
GCA_000518265_03058
Unannotated protein.
  
     0.444
Your Current Organism:
Actinomadura oligospora
NCBI taxonomy Id: 1399798
Other names: A. oligospora ATCC 43269, Actinomadura oligospora ATCC 43269
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.