STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518265_08196Unannotated protein. (818 aa)    
Predicted Functional Partners:
GCA_000518265_01964
Unannotated protein.
 
 0.999
GCA_000518265_06814
Unannotated protein.
   
 0.994
GCA_000518265_01184
Unannotated protein.
 
 0.979
GCA_000518265_07673
Unannotated protein.
 
 
 0.929
GCA_000518265_02340
Unannotated protein.
 
 0.919
GCA_000518265_07674
Unannotated protein.
 
  
 0.887
GCA_000518265_01180
Unannotated protein.
  
  
 
0.865
GCA_000518265_07675
Unannotated protein.
   
 
 0.790
GCA_000518265_07984
Unannotated protein.
    
  0.741
GCA_000518265_05292
Unannotated protein.
   
 
 0.702
Your Current Organism:
Actinomadura oligospora
NCBI taxonomy Id: 1399798
Other names: A. oligospora ATCC 43269, Actinomadura oligospora ATCC 43269
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.