STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD81_3863TRAM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (579 aa)    
Predicted Functional Partners:
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
    0.888
CDD81_1608
WD_REPEATS_REGION domain-containing protein.
   
    0.859
CDD81_3812
Uncharacterized protein.
   
  
 0.841
CDD81_4411
WD_REPEATS_REGION domain-containing protein.
   
    0.803
CDD81_5454
Brix domain-containing protein.
   
  
 0.795
CDD81_1480
Uncharacterized protein.
  
    0.768
CDD81_3308
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.744
CDD81_2125
WD_REPEATS_REGION domain-containing protein.
   
    0.739
CDD81_1222
ATP-dependent RNA helicase DBP10.
  
    0.738
CDD81_2210
Uncharacterized protein.
   
    0.737
Your Current Organism:
Ophiocordyceps australis
NCBI taxonomy Id: 1399860
Other names: Cordyceps australis, Cordyceps unilateralis var. australis, O. australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.