STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR51_01145Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
CR51_03610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.879
CR51_12555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.879
CR51_37710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.879
CR51_21695
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
   
 0.847
CR51_24425
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.841
CR51_39300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.835
CR51_06695
Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.831
CR51_14490
Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.831
CR51_22310
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.831
CR51_33720
Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.831
Your Current Organism:
Caballeronia megalochromosomata
NCBI taxonomy Id: 1399969
Other names: Burkholderia megalochromosomata, Burkholderia megalochromosomata Baek et al. 2015, Burkholderia sp. JC2949, C. megalochromosomata, Caballeronia megalochromosomata (Baek et al. 2015) Dobritsa and Samadpour 2016, JCM 19905, KACC 17925, strain JC2949
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