STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR51_08095ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)    
Predicted Functional Partners:
CR51_33010
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.986
CR51_02270
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.949
CR51_24290
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.949
CR51_41465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.897
CR51_16615
Rubsico expression protein CbbX; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.894
dnaK-2
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.881
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.879
CR51_06925
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.877
CR51_13125
Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.877
CR51_06715
N-6 DNA methylase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.872
Your Current Organism:
Caballeronia megalochromosomata
NCBI taxonomy Id: 1399969
Other names: Burkholderia megalochromosomata, Burkholderia megalochromosomata Baek et al. 2015, Burkholderia sp. JC2949, C. megalochromosomata, Caballeronia megalochromosomata (Baek et al. 2015) Dobritsa and Samadpour 2016, JCM 19905, KACC 17925, strain JC2949
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.