STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR51_15050Phasin; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)    
Predicted Functional Partners:
CR51_29465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
CR51_17070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.741
CR51_30595
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
CR51_22735
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
CR51_05740
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
CR51_05140
Transglycosylase SLT domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
CR51_11525
Polyhydroxyalkanoate biosynthesis repressor PhaR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.668
CR51_26505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
CR51_15365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
CR51_29830
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
Your Current Organism:
Caballeronia megalochromosomata
NCBI taxonomy Id: 1399969
Other names: Burkholderia megalochromosomata, Burkholderia megalochromosomata Baek et al. 2015, Burkholderia sp. JC2949, C. megalochromosomata, Caballeronia megalochromosomata (Baek et al. 2015) Dobritsa and Samadpour 2016, JCM 19905, KACC 17925, strain JC2949
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.