STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR51_18885Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (319 aa)    
Predicted Functional Partners:
CR51_18890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.537
CR51_18895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.514
CR51_11610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.433
CR51_01005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.412
CR51_03865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.412
CR51_05700
Magnesium chelatase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.412
CR51_10640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.412
CR51_11850
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
   
    0.412
CR51_11870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.412
Your Current Organism:
Caballeronia megalochromosomata
NCBI taxonomy Id: 1399969
Other names: Burkholderia megalochromosomata, Burkholderia megalochromosomata Baek et al. 2015, Burkholderia sp. JC2949, C. megalochromosomata, Caballeronia megalochromosomata (Baek et al. 2015) Dobritsa and Samadpour 2016, JCM 19905, KACC 17925, strain JC2949
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.