Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR51_19590 | CR51_21040 | CR51_19590 | CR51_21040 | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
CR51_19590 | CR51_29530 | CR51_19590 | CR51_29530 | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NnrU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
CR51_19590 | CR51_37055 | CR51_19590 | CR51_37055 | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.666 |
CR51_19590 | CR51_37110 | CR51_19590 | CR51_37110 | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
CR51_19590 | CR51_39030 | CR51_19590 | CR51_39030 | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
CR51_19590 | sdhB-2 | CR51_19590 | CR51_19595 | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
CR51_21040 | CR51_19590 | CR51_21040 | CR51_19590 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
CR51_21040 | CR51_39030 | CR51_21040 | CR51_39030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
CR51_29530 | CR51_19590 | CR51_29530 | CR51_19590 | NnrU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
CR51_37055 | CR51_19590 | CR51_37055 | CR51_19590 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.666 |
CR51_37055 | CR51_37110 | CR51_37055 | CR51_37110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.742 |
CR51_37110 | CR51_19590 | CR51_37110 | CR51_19590 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
CR51_37110 | CR51_37055 | CR51_37110 | CR51_37055 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.742 |
CR51_39030 | CR51_19590 | CR51_39030 | CR51_19590 | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
CR51_39030 | CR51_21040 | CR51_39030 | CR51_21040 | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
sdhB-2 | CR51_19590 | CR51_19595 | CR51_19590 | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |