STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR51_37110Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)    
Predicted Functional Partners:
CR51_37115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
CR51_37120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.803
CR51_37125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.769
CR51_37055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
CR51_37100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.734
CR51_01615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
CR51_14485
Lytic transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.
  
     0.692
CR51_01620
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
CR51_37105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.659
CR51_30610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
Your Current Organism:
Caballeronia megalochromosomata
NCBI taxonomy Id: 1399969
Other names: Burkholderia megalochromosomata, Burkholderia megalochromosomata Baek et al. 2015, Burkholderia sp. JC2949, C. megalochromosomata, Caballeronia megalochromosomata (Baek et al. 2015) Dobritsa and Samadpour 2016, JCM 19905, KACC 17925, strain JC2949
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.