STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR51_41350Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology. (819 aa)    
Predicted Functional Partners:
CR51_28345
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.836
CR51_16700
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.785
CR51_05535
protein-L-isoaspartate O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.779
pcm
Transporter; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
   
 
  0.779
CR51_19780
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.775
CR51_12440
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.772
CR51_23595
aryl-phospho-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
  
 
  0.751
CR51_29775
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.751
CR51_00770
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.743
CR51_03440
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.743
Your Current Organism:
Caballeronia megalochromosomata
NCBI taxonomy Id: 1399969
Other names: Burkholderia megalochromosomata, Burkholderia megalochromosomata Baek et al. 2015, Burkholderia sp. JC2949, C. megalochromosomata, Caballeronia megalochromosomata (Baek et al. 2015) Dobritsa and Samadpour 2016, JCM 19905, KACC 17925, strain JC2949
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