STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMR75389.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
dnaE
DNA polymerase III alpha subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
dnaN
DNA polymerase III, beta chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AMR75104.1
DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
dnaX
DNA polymerase III subunit gamma/tau / Recombinational Repair RER; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.994
AMR75033.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.808
tolC
Hypothetical protein; Internal stop; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
AMR75414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.772
tdk
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.766
AMR75335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
AMR75655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.737
Your Current Organism:
Borrelia hermsii
NCBI taxonomy Id: 140
Other names: B. hermsii, Spirochaeta hermsi, strain DAH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.