STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliF-2Flagellar M-ring protein FliF; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)    
Predicted Functional Partners:
flgC-2
Flagellar basal-body rod protein flgC; With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
flgB
Flagellar basal-body rod protein flgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (By similarity).
 
 
 0.998
fliG
Flagellar motor switch protein fliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.998
flgE
Flagellar hook protein flgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
fliF
Flagellar hook-basal body complex protein fliE; Forms a junction between the M-ring and FlgB during flagella biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.996
flgD
Basal-body rod modification protein flgD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
fliP
Flagellar biosynthetic protein fliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.992
fliG-2
Flagellar motor switch protein fliG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
fliM
Flagellar motor switch protein fliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.990
fliQ
Flagellar biosynthetic protein fliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
 
 0.990
Your Current Organism:
Borrelia hermsii
NCBI taxonomy Id: 140
Other names: B. hermsii, Spirochaeta hermsi, strain DAH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.