STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000827595_01457Unannotated protein. (646 aa)    
Predicted Functional Partners:
GCA_000827595_01468
Unannotated protein.
 
 
 0.995
GCA_000827595_01456
Unannotated protein.
 
 
 0.991
GCA_000827595_01461
Unannotated protein.
 
 
 0.960
GCA_000827595_01455
Unannotated protein.
 
  
 0.958
GCA_000827595_01459
Unannotated protein.
 
 
 0.950
GCA_000827595_01470
Unannotated protein.
 
  
 0.938
GCA_000827595_01466
Unannotated protein.
 
  
 0.890
GCA_000827595_01460
Unannotated protein.
 
  
 0.779
GCA_000827595_01936
Unannotated protein.
  
  
 
0.725
GCA_000827595_01213
Unannotated protein.
  
  
 
0.723
Your Current Organism:
Necropsobacter massiliensis
NCBI taxonomy Id: 1400001
Other names: CSUR P3511, DSM 27814, N. massiliensis, Pasteurella massiliensis, Pasteurella sp. FF6, strain FF6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.