STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY53700.13,5-diaminobexanoate dehydrogenase. (346 aa)    
Predicted Functional Partners:
AGY53694.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
  
 0.995
AGY53695.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
 
 0.995
AGY53701.1
3-keto-5-aminohexanoate cleavage enzyme.
 
 
 0.992
AGY53699.1
3,5-diaminobexanoate dehydrogenase.
 
 
0.980
AGY53697.1
Hypothetical protein.
 
     0.952
AGY53702.1
3-aminobutyrl-CoA ammonia lyase.
 
   
 0.940
mutS2
MutS2 protein.
 
   0.857
nifA
Nif-specific regulatory protein.
 
      0.831
AGY53698.1
L-lysine 2,3-aminomutase.
 
   
 0.829
atoB
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.771
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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