STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malZBeta/alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (615 aa)    
Predicted Functional Partners:
AGY53752.1
Alpha-Glucosidase.
 
  
 0.914
AGY53756.1
RagB/SusD Domain-Containing Protein.
 
  
 0.911
AGY53757.1
NB-Dependent Receptor Plug.
 
   
 0.891
treZ
Malto-oligosyltrehalose trehalohydrolase; Belongs to the glycosyl hydrolase 13 family.
 
  
0.884
yhdG
Putative amino acid permease YhdG.
   
 0.785
AGY53755.1
Outer Membrane Protein SusE.
 
  
 0.783
glgA
Glycogen synthase.
 
  
 0.580
AGY53758.1
Regulatory Protein SusR.
 
     0.577
AGY53668.1
Alpha Amylase Catalytic Region.
 
     0.551
AGY54140.1
Alpha-Glucosidase.
 
  
 0.540
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.