STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cat24-hydroxybutyrate coenzyme A transferase. (434 aa)    
Predicted Functional Partners:
mutA
Methylmalonyl-CoA mutase small subunit.
  
  
 0.685
mutB
Methylmalonyl-CoA mutase large subunit.
  
  
 0.685
AGY54034.1
Hypothetical protein.
       0.543
AGY54035.1
Nucleoside triphosphate pyrophosphohydrolase MazG.
       0.543
AGY54036.1
Hypothetical protein.
       0.543
AGY54031.1
Signal Transduction Protein With CBS Domains.
  
    0.477
zraS
Histidine Kinase.
  
    0.475
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
       0.465
AGY54028.1
PHP Domain Protein.
       0.465
AGY54029.1
HPr Kinase.
       0.465
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.