STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54482.1Beta-hexosaminidase. (545 aa)    
Predicted Functional Partners:
chiA1
Chitinase A1; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.955
nahA
Beta-hexosaminidase.
  
  
 
0.913
AGY54068.1
Beta-hexosaminidase.
  
  
 
0.911
AGY53005.1
N-Acylglucosamine 2-Epimerase.
    
  0.901
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
       0.773
AGY53257.1
Alpha-1 2-Mannosidase.
   
 0.753
AGY54252.1
N-acyl-D-glutamate deacylase.
     0.603
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.567
AGY54481.1
Hypothetical protein.
       0.535
nagB
Putative glucosamine-6-phosphate deaminase-like protein.
 
   
 0.450
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.