STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54515.1Cyclase Family Protein. (268 aa)    
Predicted Functional Partners:
AGY54514.1
Hypothetical protein.
       0.605
AGY54516.1
Hypothetical protein.
       0.544
AGY54517.1
Hypothetical protein.
       0.540
AGY53701.1
3-keto-5-aminohexanoate cleavage enzyme.
  
    0.528
AGY54518.1
Hypothetical protein.
       0.508
AGY54519.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.501
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.