STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54528.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
AGY54529.1
Adenylate Cyclase.
       0.785
AGY54527.1
Hypothetical protein.
       0.711
AGY54525.1
Two Component Regulator Three Y Domain-Containing Protein.
     
 0.674
citT
Membrane protein.
       0.644
oprP
Porin P.
       0.610
AGY54531.1
Hypothetical protein.
       0.586
AGY54532.1
Putative 12.7 kDa protein in trpE 5'region.
       0.582
AGY54524.1
Hypothetical protein.
       0.566
pdhA
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
       0.423
AGY53750.1
Aerobic respiration control sensor protein ArcB.
     
 0.422
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.