STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
luxNAutoinducer 1 sensor kinase/phosphatase luxN. (131 aa)    
Predicted Functional Partners:
AGY53735.1
Hypothetical protein.
 
 
0.999
luxQ
Autoinducer 2 sensor kinase/phosphatase luxQ.
 
 0.999
AGY53750.1
Aerobic respiration control sensor protein ArcB.
 
 
0.999
sasA
Adaptive-response sensory-kinase sasA.
 
 0.999
AGY53795.1
Autoinducer 2 sensor kinase/phosphatase luxQ.
 
 
0.999
AGY53905.1
Autoinducer 2 sensor kinase/phosphatase luxQ.
 
 0.999
AGY54670.1
Sensor protein gacS.
 
 0.999
pleD
Response regulator PleD.
 
 
0.999
AGY54919.1
Sensor protein gacS.
 
 0.999
AGY52877.1
Sensor protein gacS.
 
 0.999
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.