STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54741.1Glycosyltransferase. (285 aa)    
Predicted Functional Partners:
AGY54742.1
Hypothetical protein.
 
   0.947
icaA
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
 
 0.936
rfaB
Putative glycosyltransferase.
 
   0.926
AGY54752.1
Hypothetical protein.
 
  
 0.789
AGY54751.1
Hypothetical protein.
 
  
 0.774
AGY54738.1
Putative glycosyltransferase yibD.
 
     0.761
AGY54749.1
Glycosyltransferase.
 
 
 0.759
AGY54750.1
Glycosyl Transferase Family Protein.
 
  
 0.693
rfbU
Protein rfbU.
 
   0.639
AGY54728.1
Hypothetical protein.
  
     0.601
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.