STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54895.1Nodulation protein nolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1004 aa)    
Predicted Functional Partners:
AGY54896.1
Multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.961
AGY54453.1
Heavy Metal Efflux Pump CzcA Family.
 
 
 0.929
AGY54894.1
Outer Membrane Efflux Protein.
   0.879
mdtA
Multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.759
AGY54351.1
Multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.716
AGY54893.1
Inner membrane protein ypdA.
 
     0.690
nolF
Nodulation protein nolF.
 
 
 0.688
AGY54584.1
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.687
ypdB
Putative response regulatory protein.
 
     0.571
macA
Putative macrolide-specific efflux protein macA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.446
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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