STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54898.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
AGY53470.1
NB-Dependent Receptor.
  
     0.657
AGY54897.1
Hypothetical protein.
       0.581
AGY54878.1
Mobilization Protein.
  
     0.544
AGY54899.1
Glycosyl Transferase Family.
       0.534
AGY54882.1
Outer Membrane Protein.
  
     0.504
AGY54874.1
Hypothetical protein.
  
     0.499
AGY53618.1
Hypothetical protein.
  
     0.497
btuB
Vitamin B12 transporter BtuB.
  
     0.471
AGY54042.1
Hypothetical protein.
  
     0.457
AGY54896.1
Multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.447
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.