STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY54915.1Macrolide export ATP-binding/permease protein MacB. (392 aa)    
Predicted Functional Partners:
AGY54916.1
Putative ABC transporter ATP-binding protein.
 
 
 0.979
AGY54917.1
Hypothetical protein.
 
     0.949
AGY54913.1
Hypothetical protein.
 
 
 
 0.913
AGY53145.1
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.898
AGY54914.1
ABC Transporter Permease.
    
0.897
AGY52803.1
Putative ABC transporter ATP-binding protein.
 
 
 0.870
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
 0.774
AGY54919.1
Sensor protein gacS.
  
    0.639
AGY54918.1
Hypothetical protein.
       0.611
AGY53217.1
Macrolide-specific efflux protein macA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.440
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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