STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY52881.1NMT1/THI5 Like Domain Protein. (350 aa)    
Predicted Functional Partners:
atoS
Signal transduction histidine-protein kinase AtoS.
 
   
 0.926
icfG
Protein icfG.
 
     0.891
AGY54052.1
Anti-Sigma-Factor Antagonist.
 
     0.671
AGY52880.1
FAD Dependent Oxidoreductase.
       0.603
tcyB
L-cystine transport system permease protein tcyB.
 
  
 0.602
glnP
Putative glutamine transport system permease protein glnP.
 
  
 0.590
AGY53086.1
Hypothetical protein.
  
  
 0.579
AGY53601.1
Anti-Sigma Regulatory Factor.
 
     0.535
gph
Phosphoglycolate phosphatase.
       0.502
feoB1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.453
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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