STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manAMannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family. (324 aa)    
Predicted Functional Partners:
AGY54507.1
Mannan Endo-1 4-Beta-Mannosidase.
  
 0.997
AGY54506.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
  
 
0.912
kdgK
Putative sugar kinase.
     
 0.802
celE
Endoglucanase E.
 
   
 0.728
AGY53044.1
Sialate O-Acetylesterase.
 
   
 0.721
AGY53045.1
Sialate O-Acetylesterase.
 
   
 0.672
AGY53046.1
Glycosidase.
 
   
 0.661
AGY53050.1
NB-Dependent Receptor Plug.
 
  
 0.640
AGY53706.1
Thymidylate kinase.
   
 
 0.602
sglT
Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.593
Your Current Organism:
Bacteroidales bacterium CF
NCBI taxonomy Id: 1400053
Other names: B. bacterium CF
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