STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY75677.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)    
Predicted Functional Partners:
ETY74840.1
cbxX/cfqX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.727
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.650
ETY75676.1
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.567
ETY75755.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.543
ETY75271.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.543
ETY75497.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.520
ETY75006.1
Signal transduction histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.520
ETY74340.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.520
ETY73706.1
Signal transduction histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.520
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.