STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY75170.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)    
Predicted Functional Partners:
ETY75171.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
ETY74998.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.643
ETY75206.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.577
ETY72907.1
Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.561
ETY73417.1
Diadenosine tetraphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.553
ETY73821.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.550
ETY73977.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.549
ETY74708.1
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
   
    0.523
ETY73944.1
NADH-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.523
ETY73787.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
   
    0.523
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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