STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY74078.1Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
ETY74080.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
ETY74079.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.967
ETY74075.1
Tail component protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.915
ETY74073.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.910
ETY74074.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.909
ETY74082.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.843
ETY74070.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.826
ETY74083.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.792
ETY74081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
ETY74077.1
DNA packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.