STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY73743.1Terminase; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)    
Predicted Functional Partners:
ETY73742.1
Terminase; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
ETY73741.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.901
ETY73740.1
Peptidase U35; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.881
ETY75745.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
ETY72799.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
ETY72784.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
ETY75742.1
Endonuclease; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.814
ETY73744.1
Endonuclease; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.814
ETY72796.1
Endonuclease; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.810
ETY75744.1
Terminase; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.808
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.