STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY73384.1Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (812 aa)    
Predicted Functional Partners:
ETY73382.1
Cell surface protein; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.823
ETY72876.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.788
ETY74219.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
  
 0.754
ETY74173.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.738
ETY73383.1
Cell surface protein; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
ETY73394.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.737
ETY74448.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.728
ETY73942.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.728
dltC
D-alanine--poly(phosphoribitol) ligase; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
  
 
 0.672
ETY72912.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.654
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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