STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY72709.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)    
Predicted Functional Partners:
ETY72716.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.836
ETY72710.1
Amylovoran biosynthesis protein AmsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.804
ETY72711.1
Capsular polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.803
ETY72717.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.788
ETY72718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.783
ETY72719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ETY74192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.624
ETY72715.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.444
ETY72712.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.443
ETY72714.1
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.442
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.