STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETY72518.1Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
ETY72519.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.899
ETY72592.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.809
ETY75119.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
ETY74172.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
ETY73262.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
ETY73913.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
ETY73382.1
Cell surface protein; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
ETY72911.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
ETY74578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.648
ETY73912.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
Your Current Organism:
Lactobacillus fabifermentans
NCBI taxonomy Id: 1400520
Other names: L. fabifermentans T30PCM01, Lactobacillus fabifermentans T30PCM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.