STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701385_01337Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_000701385_01338
Unannotated protein.
 
     0.814
GCA_000701385_01339
Unannotated protein.
       0.808
GCA_000701385_01340
Unannotated protein.
       0.766
GCA_000701385_01336
Unannotated protein.
       0.723
GCA_000701385_01341
Unannotated protein.
       0.614
GCA_000701385_00722
Unannotated protein.
    
 
 0.541
GCA_000701385_01346
Unannotated protein.
   
   0.469
GCA_000701385_01342
Unannotated protein.
       0.446
GCA_000701385_01345
Unannotated protein.
       0.422
GCA_000701385_01347
Unannotated protein.
       0.418
Your Current Organism:
Pelagibacter ubique HTCC7214
NCBI taxonomy Id: 1400524
Other names: C. Pelagibacter ubique HTCC7214, Candidatus Pelagibacter ubique HTCC7214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.