STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAMethionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (321 aa)    
Predicted Functional Partners:
OME95029.1
Methylamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
OME90324.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
OME89419.1
Thioredoxin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
OME88929.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.892
OME89375.1
NrdH-redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.875
OME96439.1
NrdH-redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.857
OME94900.1
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.825
clpX
ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
 
 0.819
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.812
Your Current Organism:
Paenibacillus lautus
NCBI taxonomy Id: 1401
Other names: ATCC 43898, Bacillus lautus, CIP 103118, DSM 3035, IFO 15380, JCM 9073, LMG 11157, LMG:11157, NBRC 15380, NRRL NRS-666, P. lautus, Paenibacillus sp. HF_07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.