STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK123_07005Chemotaxis protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)    
Predicted Functional Partners:
OME95039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.804
OME96828.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
OME90991.1
Sheath polysaccharide-degrading enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.720
OME89148.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
OME89114.1
Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
OME91302.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.642
OME90721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
OME91458.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.610
OME96142.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
OME91467.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.581
Your Current Organism:
Paenibacillus lautus
NCBI taxonomy Id: 1401
Other names: ATCC 43898, Bacillus lautus, CIP 103118, DSM 3035, IFO 15380, JCM 9073, LMG 11157, LMG:11157, NBRC 15380, NRRL NRS-666, P. lautus, Paenibacillus sp. HF_07
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