Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OME89768.1 | OME91397.1 | BK123_25740 | BK123_18230 | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
OME90353.1 | OME90354.1 | BK123_23970 | BK123_23975 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
OME90353.1 | OME91397.1 | BK123_23970 | BK123_18230 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
OME90354.1 | OME90353.1 | BK123_23975 | BK123_23970 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
OME90354.1 | OME91397.1 | BK123_23975 | BK123_18230 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
OME91397.1 | OME89768.1 | BK123_18230 | BK123_25740 | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
OME91397.1 | OME90353.1 | BK123_18230 | BK123_23970 | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
OME91397.1 | OME90354.1 | BK123_18230 | BK123_23975 | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
OME91397.1 | OME91398.1 | BK123_18230 | BK123_18235 | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
OME91397.1 | OME95005.1 | BK123_18230 | BK123_07895 | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metal-dependent hydrolase; Possible metal-dependent hydrolase; Belongs to the metal hydrolase YfiT family. | 0.477 |
OME91397.1 | rlmN-2 | BK123_18230 | BK123_18225 | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.478 |
OME91398.1 | OME91397.1 | BK123_18235 | BK123_18230 | Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
OME91398.1 | rlmN-2 | BK123_18235 | BK123_18225 | Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.476 |
OME95005.1 | OME91397.1 | BK123_07895 | BK123_18230 | Metal-dependent hydrolase; Possible metal-dependent hydrolase; Belongs to the metal hydrolase YfiT family. | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.477 |
rlmN-2 | OME91397.1 | BK123_18225 | BK123_18230 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | DUF3052 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
rlmN-2 | OME91398.1 | BK123_18225 | BK123_18235 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.476 |