Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BK123_06595 | OME82052.1 | BK123_06595 | BK123_34235 | Transposase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OME82052.1 | BK123_06595 | BK123_34235 | BK123_06595 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transposase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OME82052.1 | OME91294.1 | BK123_34235 | BK123_17665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.691 |
OME82052.1 | OME92152.1 | BK123_34235 | BK123_16135 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
OME82052.1 | OME94620.1 | BK123_34235 | BK123_05655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
OME82052.1 | OME95043.1 | BK123_34235 | BK123_08110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
OME91294.1 | OME82052.1 | BK123_17665 | BK123_34235 | Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.691 |
OME91294.1 | OME92152.1 | BK123_17665 | BK123_16135 | Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.822 |
OME92152.1 | OME82052.1 | BK123_16135 | BK123_34235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
OME92152.1 | OME91294.1 | BK123_16135 | BK123_17665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.822 |
OME94620.1 | OME82052.1 | BK123_05655 | BK123_34235 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
OME95043.1 | OME82052.1 | BK123_08110 | BK123_34235 | 2-phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |