STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P857_975UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. (459 aa)    
Predicted Functional Partners:
murE
UDP-N-acetylmuramyl-tripeptide synthetases family protein; Belongs to the MurCDEF family. MurE subfamily.
 
 0.999
mraY
phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
 0.997
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
 
 0.994
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 0.989
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
 
 
 0.861
P857_684
EPSP synthase family protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
  
 0.833
aspC
Aspartate aminotransferase.
 
   
 0.719
P857_405
Penicillin binding transpeptidase domain protein.
  
 0.706
gshB
Glutathione synthetase.
    
  0.698
ftsA
Cell division protein FtsA.
  
 
 0.685
Your Current Organism:
Xenolissoclinum pacificiensis
NCBI taxonomy Id: 1401685
Other names: Anaplasmataceae bacterium L6, C. Xenolissoclinum pacificiensis L6, Candidatus Xenolissoclinum pacificiensis L6
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